I did something similar when I moved from my Synology NAS to a Dell Micro PC. I choose open media vault which is built on Debian. It works much faster that the NAS
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Did you use the OMV Docker add on for your containers? How are your drives and shares set up?
I installed docker using the Debian instructions as I manage from the command line. I have one system drive and one data drive. The data drive is setup as a share with all of my media. The main use case for me is Plex and the *arr services. I have an offsite backup of my media. Hope this helps